BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023D03LP1|AL428038
(938 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1824 0.0
3x_Contig1723 367 e-101
>3x_Contig1805
Length = 19369
Score = 1824 bits (919), Expect = 0.0
Identities = 930/933 (99%), Gaps = 1/933 (0%)
Strand = Plus / Minus
Query: 1 atattcgcagatygttacggttacaggcttgtgttgattgctggcttggttcttttgatt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13131 atattcgcagatcgttacggttacaggcttgtgttgattgctggcttggttcttttgatt 13072
Query: 61 gctttcaattttattctctactttgcaaacagtttgactatgattgctataggccaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13071 gctttcaattttattctctactttgcaaacagtttgactatgattgctataggccaaatt 13012
Query: 121 ttaagtggtatcccatggggctcattccaaacactctgcgtttcatatgctagtgaggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13011 ttaagtggtatcccatggggctcattccaaacactctgcgtttcatatgctagtgaggtc 12952
Query: 181 tgtccattggttttgagatactatttgacaacatacatcaatttatgttggcttatcggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12951 tgtccattggttttgagatactatttgacaacatacatcaatttatgttggcttatcggg 12892
Query: 241 caagtgattgccgctggagttttgaaggcatgtcaggaacatcttgccaatgatgagcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12891 caagtgattgccgctggagttttgaaggcatgtcaggaacatcttgccaatgatgagcta 12832
Query: 301 ggttggagacttccatttgcgttacagtggatatggccggttcctttgattgtaggtatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12831 ggttggagacttccatttgcgttacagtggatatggccggttcctttgattgtaggtatt 12772
Query: 361 taccttgctccagaatctccttggtggttggttagaaagggcaggatcgatcaagccaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12771 taccttgctccagaatctccttggtggttggttagaaagggcaggatcgatcaagccaaa 12712
Query: 421 cgatccgtcacaagaattctaaccctgcccacttctgaaaaggacaagctaactgacata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12711 cgatccgtcacaagaattctaaccctgcccacttctgaaaaggacaagctaactgacata 12652
Query: 481 atgatcacaaaaatgagaatgactgtcgagaaagaaaaccgtcttgcttccgaatcaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12651 atgatcacaaaaatgagaatgactgtcgagaaagaaaaccgtcttgcttccgaatcaagt 12592
Query: 541 tcttatatggactgtttcaagggcattgatgcgagaagaaccaggataacgtgtctcaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12591 tcttatatggactgtttcaagggcattgatgcgagaagaaccaggataacgtgtctcaca 12532
Query: 601 tgggtcatgcaaaatttaacgggatccgctttgatgggatactccacctatttctatgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12531 tgggtcatgcaaaatttaacgggatccgctttgatgggatactccacctatttctatgaa 12472
Query: 661 aaagccgggttggacacttctgcagccttcactttttccatcattcaatacgtgattggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12471 aaagccgggttggacacttctgcagccttcactttttccatcattcaatacgtgattggt 12412
Query: 721 attgttggtaccttaacatcatggttcctatcttccagagctggtcgcttcacgattctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12411 attgttggtaccttaacatcatggttcctatcttccagagctggtcgcttcacgattctc 12352
Query: 781 ttttggggtgtctttttccagacgatagttatgttcattacttggtggcctcggattcag 840
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 12351 ttttggggtgtctttttccagacgatagttatgttcattac-tggtggcctcggattcag 12293
Query: 841 cagccctgaaggtgccagttggggtgctggttccatgttgctgatctacaacttctttta 900
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12292 cagctctgaaggtgccagttggggtgctggttccatgttgctgatctacaacttctttta 12233
Query: 901 caactccaccttaggtcctgttgtttactgtgt 933
|||||||||||||||||||||||||||||||||
Sbjct: 12232 caactccaccttaggtcctgttgtttactgtgt 12200
>3x_Contig1723
Length = 15177
Score = 367 bits (185), Expect = e-101
Identities = 742/927 (80%), Gaps = 1/927 (0%)
Strand = Plus / Minus
Query: 7 gcagatygttacggttacaggcttgtgttgattgctggcttggttcttttgattgctttc 66
|||||| |||| |||||||| |||| ||||| | |||||| || |||||||| | |
Sbjct: 14397 gcagatcgttatggttacagaattgtcttgatcggcggcttgattgctttgattggtcta 14338
Query: 67 aattttattctctactttgcaaacagtttgactatgattgctataggccaaattttaagt 126
|| |||||| | || ||||| |||||||| | ||||||||| |||||||||||||| ||
Sbjct: 14337 aactttattttatattttgcgaacagtttagcaatgattgctgtaggccaaattttatgt 14278
Query: 127 ggtatcccatggggctcattccaaacactctgcgtttcatatgctagtgaggtctgtcca 186
||||| |||||||| ||||| ||||| || || || || |||| |||||| || ||||||
Sbjct: 14277 ggtattccatgggggtcatttcaaactctttgtgtctcttatggtagtgaagtttgtcca 14218
Query: 187 ttggttttgagatactatttgacaacatacatcaatttatgttggcttatcgggcaagtg 246
|||||||| ||||| ||| |||| || || |||||| |||| |||||| | || ||| ||
Sbjct: 14217 ttggttttaagatattatctgaccacttatatcaatctatgctggcttgttggtcaattg 14158
Query: 247 attgccgctggagttttgaaggcatgtcaggaacatcttgccaatgatgagctaggttgg 306
||||| ||||| || ||||| ||||| ||||| ||| | || || || || ||||||||
Sbjct: 14157 attgctgctggtgtcttgaaagcatgccaggagcatttagcaaacgaccagttaggttgg 14098
Query: 307 agacttccatttgcgttacagtggatatggccggttcctttgattgtaggtatttacctt 366
|| ||||||||||| || || ||| ||||||| |||| ||||| | || ||||| ||
Sbjct: 14097 aggcttccatttgccttgcaatgggtatggcccattccgttgataattggaatttatcta 14038
Query: 367 gctccagaatctccttggtggttggttagaaagggcaggatcgatcaagccaaacgatcc 426
||||| ||||| || ||||||||||| ||||| || | || || |||||||| ||||
Sbjct: 14037 gctcctgaatcaccatggtggttggtgagaaaaggtaaaatggaacaagccaagagatct 13978
Query: 427 gtcacaagaattctaaccctgcccacttctgaaaaggacaagctaactgacataatgatc 486
|||||||||||| | || ||||| || ||||||||||||| | |||| | |||||
Sbjct: 13977 gtcacaagaattttgactctgccagctactgaaaaggacaatttgtctgatttgatgatt 13918
Query: 487 acaaaaatgagaatgactgtcgagaaagaaaaccgtcttgcttccgaatcaagttcttat 546
||||| |||| |||||| || || |||||||| | | | || | |||||||| ||
Sbjct: 13917 acaaagatgaaaatgaccgtagaaaaagaaaatagattggtctcgcagtcaagttcatac 13858
Query: 547 atggactgtttcaagggcattgatgcgagaagaaccaggataacgtgtctcacatgggtc 606
||||| ||||||||||| |||| ||||||||||||||| | ||| | || |||||
Sbjct: 13857 atggattgtttcaagggtgttgactttagaagaaccaggatagcatgtttaacctgggtt 13798
Query: 607 atgcaaaatttaacgggatccgctttgatgggatactccacctatttctatgaaaaagcc 666
|| |||||||| || ||||| | || ||||| |||||||| ||||| ||||| |||||
Sbjct: 13797 attcaaaatttgactggatctccgttaatgggttactccacgtatttttatgagaaagca 13738
Query: 667 gggttggacacttctgcagccttcactttttccatcattcaatacgtgattggtattgtt 726
|| || || || ||| | || || || || || || |||||||| || || || ||| ||
Sbjct: 13737 ggattagatacctcttctgcatttacattctctattattcaatatgtcatcggaattatt 13678
Query: 727 ggtaccttaacatcatggttcctatcttccagagctggtcgcttcacgattctcttttgg 786
||||| || |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 13677 ggtactttgacatcatggttcctgtcgtccagagctggtcgcttcacgattctcttttgg 13618
Query: 787 ggtgtctttttccagacgatagttatgttcattacttggtggcctcggattcagcagccc 846
||||| |||||||| | | |||| ||| ||||||| |||||||| || |||||||| |
Sbjct: 13617 ggtgtatttttccaaatggtagtcatgctcattac-cggtggccttgggttcagcagttc 13559
Query: 847 tgaaggtgccagttggggtgctggttccatgttgctgatctacaacttcttttacaactc 906
| ||||||| || |||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 13558 tcaaggtgcaagctggggtgcaggttctatgttgctgatctacaacttcttctacaactc 13499
Query: 907 caccttaggtcctgttgtttactgtgt 933
||||||||||| |||||||| |||||
Sbjct: 13498 aaccttaggtcccgttgtttattgtgt 13472
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5823
Number of Sequences: 1807
Number of extensions: 5823
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 2
length of query: 938
length of database: 10,358,551
effective HSP length: 16
effective length of query: 922
effective length of database: 10,329,639
effective search space: 9523927158
effective search space used: 9523927158
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)